BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009H02SP1|AL426105
(817 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1448 694 0.0
>3x_Contig1448
Length = 10333
Score = 694 bits (331), Expect = 0.0
Identities = 394/427 (92%)
Strand = Plus / Minus
Query: 391 aggcgaamaagmagaggcmaaawcawccgaacaammaaawgtacaaggaaaagaaaacwt 450
||||||| || ||||| ||| || ||| || | || || ||||||||||||||| |
Sbjct: 3499 aggcgaactagctgaggccaaatcatccgtactacctaatgttcaaggaaaagaaaactt 3440
Query: 451 gcaaaarawcamaagawttwtggagggacaagaattgtttgaagawgccttagaaatwtc 510
|| ||| | | ||| || ||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 3439 gctaaagatctctagatttttggagggacaagatttgtttgaagatgccttagaaatttc 3380
Query: 511 accagacgctgagcagaagtttgawctagcaaaaaaataaggccgamaatcactggcgca 570
|||||||||||||||||||||||| ||||| | |||| ||||||| ||||||||||||
Sbjct: 3379 accagacgctgagcagaagtttgatctagctattaaattaggccgactatcactggcgca 3320
Query: 571 agaaatattgtccgagcaggaaagtgagaacagatggattcaattgggtgatgctgcctt 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3319 agaaatattgtccgagcaggaaagtgagaacagatggattcaattgggtgatgctgcctt 3260
Query: 631 aaagaaattcaatttcactttagctttgcaatgttatgaaaaggcaaatgatctagaatc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3259 aaagaaattcaatttcactttagctttgcaatgttatgaaaaggcaaatgatctagaatc 3200
Query: 691 ccttttcttgttatattcttcattcaacaatagggaagagttggtttcattggcaaagaa 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3199 ccttttcttgttatattcttcattcaacaatagggaagagttggtttcattggcaaagaa 3140
Query: 751 tgctgagacttctggtaagttcaacctagctttcaatgcttattgggtagcaggtgacat 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3139 tgctgagacttctggtaagttcaacctagctttcaatgcttattgggtagcaggtgacat 3080
Query: 811 agctgga 817
|||||||
Sbjct: 3079 agctgga 3073
Score = 369 bits (176), Expect = e-102
Identities = 216/242 (89%)
Strand = Plus / Minus
Query: 1 gatcatcaacaaagaccatgaaacagactctgctgaagaagctaatgcttacgctctgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3889 gatcatcaacaaagaccatgaaacagactctgctgaagaagctaatgcttacgctctgtt 3830
Query: 61 gttcaataaggatgtttacgatgaggcggtttcagctggaagtattgatgaagawggagw 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 3829 gttcaataaggatgtttacgatgaggcggtttcagctggaagtattgatgaagatggtgt 3770
Query: 121 araaraarcgtttgamgwattaaacgaagtttcagagggwawmamgtcaggaaagtrggt 180
| || | ||||||| | |||| |||||||||||||||| | | |||||| |||| |||
Sbjct: 3769 agaagatgcgtttgacgtattatacgaagtttcagagggtatcacgtcaggtaagtgggt 3710
Query: 181 aggwgatgtcttcattttmaccaccccaacaaawagawaaaamaamtttgttggtggwaa 240
|| |||||||||||||| |||||||||||||| ||| ||| | ||||||||||| ||
Sbjct: 3709 tggtgatgtcttcattttcaccaccccaacaaatagattaaactactttgttggtggtaa 3650
Query: 241 aa 242
||
Sbjct: 3649 aa 3648
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.45 0.723 1.37
Gapped
Lambda K H
1.45 0.723 1.37
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4201
Number of Sequences: 1807
Number of extensions: 4201
Number of successful extensions: 97
Number of sequences better than 1.0e-20: 1
length of query: 817
length of database: 10,358,551
effective HSP length: 16
effective length of query: 801
effective length of database: 10,329,639
effective search space: 8274040839
effective search space used: 8274040839
T: 0
A: 40
X1: 5 (10.5 bits)
X2: 14 (29.4 bits)
S1: 11 (23.5 bits)
S2: 48 (101.2 bits)